Epitopes described in "Evidence that structural rearrangements and/or flexibility during TCR binding can contribute to T cell activation."

Article Authors:Michelle Krogsgaard; Nelida Prado; Erin J Adams; Xiao-lin He; Dar-Chone Chow; Darcy B Wilson; K Christopher Garcia; Mark M Davis
Article Title:Evidence that structural rearrangements and/or flexibility during TCR binding can contribute to T cell activation.
Reference Detail
Reference ID:1007411
Abstract:While in many cases the half-life of T cell receptor (TCR) binding to a particular ligand is a good predictor of activation potential, numerous exceptions suggest that other physical parameter(s) must also play a role. Accordingly, we analyzed the thermodynamics of TCR binding to a series of peptide-MHC ligands, three of which are more stimulatory than their stability of binding would predict. Strikingly, we find that during TCR binding these outliers show anomalously large changes in heat capacity, an indicator of conformational change or flexibility in a binding interaction. By combining the values for heat capacity (DeltaCp) and the half-life of TCR binding (t(1/2)), we find that we can accurately predict the degree of T cell stimulation. Structural analysis shows significant changes in the central TCR contact residue of the peptide-MHC, indicating that structural rearrangements within the TCR-peptide-MHC interface can contribute to T cell activation.
Affiliations:Howard Hughes Medical Institute, Stanford University School of Medicine, Stanford, CA 94305, USA.
Reference Type:Literature
PubMed ID:14690592
Journal:Mol Cell
Journal Volume:12
Article Pages:1367-78
Journal ISSN:1097-2765
Article Chemical List:Insect Proteins;Ligands;Peptides;Receptors, Antigen, T-Cell;Cytochromes c
Article MeSH List:Amino Acid Substitution; Animals; Calorimetry; Cytochromes c(chemistry; metabolism ); Insect Proteins(chemistry; metabolism ); Ligands; Lymphocyte Activation; Major Histocompatibility Complex; Moths; Peptides(chemistry; metabolism ); Protein Binding; Protein Conformation; Receptors, Antigen, T-Cell(chemistry; metabolism ); Surface Plasmon Resonance; T-Lymphocytes(metabolism ); Temperature; Thermodynamics
Curation Last Updated:2015-07-30 20:20:39